Fig. 2

Metagenomics of Apis mellifera. a A flow diagram of the microbiome analysis using reads which did not align to the Apis mellifera reference genome. b A blobplot generated from contigs using unaligned reads from all samples. Contigs are plotted based on their GC content (x-axis) and coverage (y-axis), scaled by span, and coloured by their phylum assignation. c The span of de novo assembled contigs which were assigned to given phyla is displayed for the 12 most abundant phyla across all samples. d A network based on the coverage/contig from each sample representing microbiome composition/unaligned reads