Fig. 4
Phenotypic effects (regression beta-coefficients) and derived allele frequencies for the 18 index SNPs showing independent association in the CANDELA sample (Table 1). In a traits are shown at the top, with illustrative color ranges. Beta-coefficients have been standardized to facilitate comparison across traits. Positive betas are shown in green and negative betas in blue (with color intensity reflecting beta values as indicated on the scale to the right). Significant betas are marked with a cross. In b allele frequencies are shown for the CEU, IBS, CHB and YRI samples from the 1000 Genomes Project Phase 3, the CANDELA sample and Native Americans (from Reich et al.17 and Chacon-Duque et al.79). On the right is shown the color scale used to represent allele frequencies (Supplementary Table 7)
