Fig. 3
Structural differences between UMD_CASPUR_WB_2.0 and UOA_WB_1. a Venn diagram of structural differences called in UMD_CASPUR_WB_2.0 and haplotigs when UOA_WB_1 was used as the reference. The 8664 unique and 1313 overlapping differences in haplotigs represent heterozygous alleles. Structural differences present only in UMD_CASPUR_WB_2.0 are likely assembly errors. b Total bases of structural differences in categories deletion, insertion, repeat contraction, repeat expansion, tandem contraction, and tandem expansion. For example, for deletion, we report the number of bases found in UOA_WB_1 but missing in UMD_CASPUR_WB_2.0. c Count of structural differences in the categories from part b, partitioned by size
