Table 1 Association significance between the TF binding–disrupting SNPs and gene expression in human brain tissues

rs10795

GOLGA2P7

1.63E−17

6.37E−15

1.07E−09

1.88E−07

4.50E−13 (Cau)

rs12136320

TMEM81

2.97E−05

2.00E−03

9.91E−06

7.98E−04

1.10E−06 (Putamen)

rs12912934

GOLGA2P7

2.75E−28

2.91E−25

9.30E−19

4.52E−16

1.20E−24 (Cau)

EFTUD1P1

4.07E−13

9.63E−11

8.48E−07

8.84E−05

1.10E−05 (Hyp)

DNM1P51

9.84E−05

4.96E−03

5.54E−10

1.02E−07

2.50E−11 (Front Cor)

rs16937

TMEM81

1.06E−05

8.06E−04

3.64E−10

6.88E−08

9.70E−07 (Putamen)

RBBP5

1.16E−09

1.84E−07

1.53E−04

8.56E−03

2.70E−09 (NAc)

rs1801311

NAGA

4.06E−17

1.43E−14

4.46E−29

4.42E−26

5.70E−10 (Cere)

FAM109B

1.46E−06

1.34E−04

6.23E−17

2.58E−14

6.30E−06 (Cortex)

rs223390

LRRC37A15P

2.58E−13

4.55E−11

1.43E−04

8.10E−03

2.30E−09 (Cere Hemi)

rs2269524

NAGA

5.33E−18

2.03E−15

1.04E−26

8.81E−24

2.90E−09 (Cere)

FAM109B

1.02E−06

9.73E−05

7.35E−16

2.77E−13

5.80E−06 (Cortex)

rs2270363

CORO7

2.06E−10

5.06E−08

1.72E−17

7.46E−15

8.90E−13 (ACC)

NMRAL1

1.62E−10

4.05E−08

4.88E−16

1.87E−13

9.00E−41 (Cere Hemi)

CDIP1

3.05E−07

4.40E−05

1.43E−05

1.11E−03

5.10E−34 (Cere)

rs2304204

CPT1C

8.51E−14

2.55E−11

4.56E−05

3.05E−03

2.00E−05 (Cere)

rs2385395

CNPPD1

4.21E−06

3.11E−04

1.10E−06

1.12E−04

4.10E−11 (Spinal cord)

rs2711116

DFNA5

5.07E−04

1.88E−02

6.63E−08

8.62E−06

2.00E−07 (Cortex)

rs281759

FTCDNL1

2.98E−13

6.79E−11

3.92E−11

8.51E−09

2.00E−06 (Hyp)

TYW5

2.25E−09

3.07E−07

1.80E−06

1.74E−04

5.60E−09 (Cere Hemi)

rs2856268

RLBP1

2.58E−12

5.56E−10

1.28E−08

1.89E−06

6.50E−06 (Cortex)

POLG

5.20E−05

2.87E−03

4.47E−06

3.93E−04

7.20E−09 (Cere)

rs2974999

TOM1L2

6.61E−14

4.75E−12

1.20E−04

6.97E−03

2.90E−06 (Cere)

rs340836

PROX1−AS1

9.71E−06

7.46E−04

3.16E−07

3.60E−05

3.30E−07 (Cere)

rs3814880

INO80E

2.28E−13

7.83E−11

7.60E−29

7.44E−26

3.30E−10 (Cere)

rs3822346

PCDHA10

1.96E−14

4.50E−12

1.30E−13

3.86E−11

1.40E−11 (Front Cor)

PCDHA13

3.90E−19

1.49E−16

3.21E−14

1.02E−11

4.90E−10 (Cere Hemi)

PCDHA8

2.43E−18

8.29E−16

5.03E−32

5.90E−29

3.20E−07 (Cere Hemi)

PCDHA2

3.69E−08

3.96E−06

3.96E−06

3.53E−04

6.80E−08 (Cere)

PCDHA7

9.78E−20

4.04E−17

1.30E−14

4.29E−12

5.80E−09 (Spinal cord)

rs4786494

CORO7

2.78E−10

6.71E−08

2.57E−20

1.42E−17

3.10E−13 (ACC)

rs5751195

NAGA

6.64E−19

2.71E−16

1.49E−23

1.03E−20

1.80E−21 (Cere)

WBP2NL

2.05E−41

4.08E−38

7.53E−12

1.81E−09

2.70E−09 (ACC)

rs6002621

FAM109B

3.09E−06

2.67E−04

3.53E−15

1.24E−12

3.40E−06 (Cortex)

NAGA

2.19E−17

7.87E−15

1.87E−23

1.29E−20

2.60E−09 (Cere)

rs61660810

USP32P3

5.82E−10

3.21E−08

1.40E−04

7.96E−03

2.00E−06 (Cortex)

rs6992091

FAM86B3P

5.79E−29

5.69E−26

7.93E−29

7.76E−26

7.30E−10 (Front Cor)

rs7014953

FAM86B3P

2.19E−29

2.19E−26

1.01E−26

8.58E−24

3.10E−09 (Front Cor)

rs72748702

EFTUD1P1

7.36E−14

1.95E−11

2.07E−06

1.97E−04

1.40E−05 (Hyp)

DNM1P51

1.33E−04

6.41E−03

5.39E−09

8.46E−07

2.20E−11 (Front Cor)

GOLGA2P7

1.40E−27

1.40E−24

2.36E−18

1.11E−15

1.90E−24(Cau)

rs778593

PCDHA10

5.19E−10

7.48E−08

1.50E−12

3.93E−10

2.40E−08 (Front Cor)

PCDHA13

1.06E−12

2.08E−10

2.60E−10

5.03E−08

4.00E−06 (Cere)

PCDHA8

4.71E−14

1.04E−11

6.25E−21

3.61E−18

9.10E−06 (Cere Hemi)

ZMAT2

6.87E−10

9.75E−08

1.28E−08

1.90E−06

2.40E−06 (ACC)

WDR55

1.27E−04

6.37E−03

3.83E−05

2.62E−03

1.90E−06 (Cere)

rs78532287

USP32P3

4.48E−10

2.49E−08

9.14E−13

2.46E−10

5.60E−06 (NAc)

CCDC144C

6.20E−17

5.16E−15

2.90E−11

6.42E−09

1.70E−06 (Putamen)

rs796364

FTCDNL1

1.01E−13

2.46E−11

9.50E−09

1.44E−06

5.80E−07 (Hyp)

TYW5

1.28E−08

1.54E−06

1.99E−06

1.91E−04

2.50E−08 (Cere Hemi)

rs8135801

NAGA

1.14E−17

4.22E−15

6.67E−29

6.55E−26

5.10E−09 (Cere)

FAM109B

6.60E−07

6.55E−05

3.84E−17

1.62E−14

6.30E−06 (Cortex)

rs9362397

C6orf162

3.16E−21

1.01E−18

4.47E−25

3.42E−22

7.70E−17 (Cere)