Fig. 3
Identification of functional genes or pathways present in metagenome-assembled genomes. The presence of genes or pathways are indicated by orange-shaded boxes. Aor, aldehyde:ferredoxin oxidoreductase; Kor, 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase; Por, pyruvate:ferredoxin oxidoreductase; Ior, indolepyruvate ferredoxin oxidoreductase; GHs, glycoside hydrolases; AssA, catalytic subunit of alkylsuccinate synthase; CmdA, catalytic subunit of p-cymene dehydrogenase; AhyA, catalytic subunit of alkane C2-methylene hydroxylase; H2ase, hydrogenase; DsrAB, dissimilatory sulfite reductase. Pathways were indicated as being present if at least five genes in the Embden-Meyerhof-Parnas pathway, three genes in the beta-oxidation pathway, four genes in the Wood−Ljungdahl pathway, and six genes in the TCA cycle were detected. Additional details for the central benzoyl-CoA degradation pathway can be found in Supplementary Fig. 5. Lactate and ethanol fermentation are indicated if genes encoding respective dehydrogenases were detected. More details about these functional genes and pathways can be found in the text and in Supplementary Data 4
