Fig. 3 | Nature Communications

Fig. 3

From: FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

Fig. 3

FDA-ARGOS reference genome assemblies quality metrics. Comparative microbial genome assembly quality metrics contrasted current FDA-ARGOS assemblies to 2013 and 2018 NCBI GenBank assemblies submitted for each species captured within the FDA-ARGOS database. Assembly quality metrics measured included: (a) median coverage, (b) median N50, (c) median L50, and (d) number of 2018 NCBI genomes that exhibited all, one or a specific quality control metric used to vet FDA-ARGOS genomes for inclusion. The NCBI assemblies were downloaded on August 6, 2018. For each box plot the center line represents the median value and is bounded by the 25th and 75th percentiles. The whiskers represent the min and max values

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