Fig. 2
From: In silico prediction of high-resolution Hi-C interaction matrices
HiC-Reg cross-validation performance. a The distance-stratified Pearson’s correlation plots of test data when training on the same cell line for chromosome 17 in five cell lines: Gm12878, K562, Huvec, Hmec, Nhek. The x-axis corresponds to a particular distance bin and the y-axis corresponds to the Pearson’s correlation of the counts predicted by HiC-Reg for pairs at a particular distance and the true counts. The correlation plots for three types of feature representations of pairs are shown: MULTI-CELL, WINDOW, and PAIR-CONCAT. b Area under the curve (AUC) for the distance-stratified Pearson’s correlation in all chromosomes for each of the five cell lines. The AUC is computed for test pairs using fivefold cross-validation. Source data are provided as a Source Data file.
