Fig. 4: Elevating AA levels induces time-dependent maturation of HLC and HC3X progeny. | Nature Communications

Fig. 4: Elevating AA levels induces time-dependent maturation of HLC and HC3X progeny.

From: Amino acid levels determine metabolism and CYP450 function of hepatocytes and hepatoma cell lines

Fig. 4

ac Relative CYP3A4 expression in (a) HLC D20 and HC3X D20 cultured in control medium and in medium supplemented with AA3, and an increasing amount of glycine; (b) in HLCs and HC3X cultured in control and in AAGLY medium at D20, D40, and D50 of differentiation; (c) in HLCs cultured in medium supplemented with AA3 with or without 2% of either glycine (GLY), serine (SER), alanine (ALA), leucine (LEU), proline (PRO), isoleucine (iLEU), aspartate (ASP), valine (VAL), or a mix of all of the above. N = 3 independent differentiations. Significance was calculated compared with HLC or HC3X LDM D20 with 2% DMSO by unpaired two-tailed Student’s t-test. d Relative CYP3A4/CYP2E1-dependent BFC metabolization for HLCs and HC3X grown in different media conditions at different times of differentiation and compared with PHHs. N = 3 independent differentiations. N = 4 donors for PHH 0 h and PHH 12 h. Significance was compared with PHH 0 h by unpaired two-tailed Student’s t-test. e, f IPA analysis showing major differentially expressed pathways when comparing HLC LDM D20 with (e) PHH 0 h and (f) HLC AAGLY D40. g PCA plot showing the distribution of HLCs and HC3X differentiated in different media and compared with PHH 0 h. h Quadrant analysis showing pathways that are normalized (Q1 and Q3), overexpressed (Q2), or underexpressed (Q4) when comparing HLC LDM D20 with PHH 0 h and HLC AAGLY D40. Color intensity correlates with −log(p). Data in all panels represent mean ± SEM with P-values indicated when significant. Source data are provided as a Source Data file.

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