Fig. 9: The trend of running time and RAM usage with respect to gene and cell numbers. | Nature Communications

Fig. 9: The trend of running time and RAM usage with respect to gene and cell numbers.

From: Flexible experimental designs for valid single-cell RNA-sequencing experiments allowing batch effects correction

Fig. 9

Running time and RAM usage for a,b the central processing unit (CPU) parallel version of BUSseq on eight cores of Dual Intel Xeon E5-2650 v2 2.60 GHz processors and c,d the graphics processing unit (GPU) parallel version of BUSseq on a single core of an Intel Xeon Gold 6132 processor and one NVIDIA Tesla P100 GPU. a When G = 3000 and ns = 1000, N varies from 1000 to 20,000. b When N = 1000 and ns = 1000, G varies from 1500 to 9000. c When G = 3000, N varies from 1000 to 50,000. d When N = 1000, G varies from 1500 to 9000.

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