Fig. 4: Agreement between predicted and observed CAGE signal. | Nature Communications

Fig. 4: Agreement between predicted and observed CAGE signal.

From: Deep learning for genomics using Janggu

Fig. 4

The example illustrates the agreement between predicted and observed CAGE signal on the test chromosome for the joint DNA-chromatin model. The DNA was represented as tri-nucleotide based one-hot encoding. A linear regression (red line) was fitted in order to test the agreement between predicted and observed CAGE signal. Significance of the explained variability was tested using an F-test (P-value < 2.2 × 10−16; F-stat = 3.098 × 103, one-sided).

Back to article page