Fig. 3: MM–GBSA analysis using our modeled eSRK–SP11 complexes.
From: Mechanism of self/nonself-discrimination in Brassica self-incompatibility
a Calculated ΔG values for modeled SP11s against eSRKs. Red rectangles represent tightly bound eSRK–SP11 pairs, and white to blue rectangles represent pairs with weak affinity. These values were calculated by the MM–GBSA method. b, c Sequence alignments of SP11 (b) and the hypervariable regions (HVs) of SRK (c) haplotypes with heat maps indicating energy contributions from each residue. Residues consisting of an α-helix and β-strands are shown in dark and light blue, respectively. These alignments were generated using PROMALS3D70.
