Table 2 Sample summary.
Samples | Entering study | Failed library prep | EGA dataset A | EGA dataset B |
---|---|---|---|---|
Body fluid | 37 | 7 | 25 | 5 |
 | (Serum 12, plasma 7, whole blood 5, CSF 3, urine 6, pericardial fluid 2, pleural fluid 2) | (Plasma 1, urine 2, pericardial fluid 2, pleural fluid 2) | (Serum 12, plasma 6, whole blood 4, CSF 2) | (Whole blood 1, urine 4) |
Frozen tissue | 53 | 0 | 52 | 1 |
 | (Metastatic PCa 47, primary PCa 5, kidney NL 1) |  | (Metastatic PCa 47, primary PCa 5) | (Kidney NL 1) |
Paraffin embedded (PE) tissue | 73 | 6 | 41 | 26 |
 | (Metastatic PCa 9, primary PCa 42, normal prostate 18, normal lymph node 1, BPH 2, PIN 1) | (Metastatic PCa 1, primary PCa 4, normal prostate 1) | Metastatic PCa 8, primary PCa 33) | (Primary PCa 5, noncancerous prostate and lymph node 21) |
Total | 163 | 13 | 118 | 32 |