Fig. 4: Maximum-likelihood phylogenetic trees of MAGs and the detected methyl-coenzyme M reductase (McrA) sequences. | Nature Communications

Fig. 4: Maximum-likelihood phylogenetic trees of MAGs and the detected methyl-coenzyme M reductase (McrA) sequences.

From: Thermogenic hydrocarbon biodegradation by diverse depth-stratified microbial populations at a Scotian Basin cold seep

Fig. 4

a Phylogenomic tree constructed based on alignments of 43 conserved protein sequences from Methanomicrobia MAGs; b phylogenetic tree constructed based on alignments of amino-acid sequences of mcrA genes. Bootstrap values of >70% are indicated with black circles. MAGs and McrA sequences corresponding to the same alkane metabolisms are highlighted in the same color in the two trees. Scale bars correspond to percent average amino-acid substitution over the alignment, for both trees. Sequences for amino acids used to construct McrA trees can be found in Supplementary Data 15.

Back to article page