Fig. 5: Bayesian phylogeographic reconstruction incorporating location and travel history data of the most informative sequences for virus spread and clustering in Lombardy. | Nature Communications

Fig. 5: Bayesian phylogeographic reconstruction incorporating location and travel history data of the most informative sequences for virus spread and clustering in Lombardy.

From: Genomic epidemiology of SARS-CoV-2 reveals multiple lineages and early spread of SARS-CoV-2 infections in Lombardy, Italy

Fig. 5

SARS-CoV-2 genomes from Lombardy were shown by red circles. Local clusters of SARS-CoV-2 sequences supported by a posterior probability ≥0.98 by the time-scaled maximum clade credibility tree were highlighted in red (A), in blue (B), in cyan (C), and in orange (D). Two independent chains were run for 25 million states. Parameters and trees were sampled every 1000 states.

Back to article page