Fig. 3: Content and expression of particular CAZymes by marine bacteria during the algal bloom.
From: Diatom fucan polysaccharide precipitates carbon during algal blooms
Plots show abundances of genes coding for carbohydrate-active enzymes (CAZymes) with relevance for degradation of two selected glycan substrates in the genomes of marine bacteria (at the top of each panel) and their expression during the bloom (at the bottom of each panel). Selected substrates are: β-1,3-glucan, laminarin (a) and fucose-containing sulphated polysaccharide, FCSP (b). Complete CAZymes metagenomic analysis and complete proteomic data are shown in Supplementary Fig. 7. Reads per kilobase per million (RPKM). Proteome data were analysed in a semiquantitative manner based on normalised spectral abundance factors (%NSAF). Both analyses include class-level taxonomic classifications, see Methods section. Glycoside hydrolase family (GH). c DAPI-based total microbial cell counts (TCC) during the diatom bloom of 2016.
