Fig. 1: Samples and analysis method. | Nature Communications

Fig. 1: Samples and analysis method.

From: Asymmetric thinning of the cerebral cortex across the adult lifespan is accelerated in Alzheimer’s disease

Fig. 1

a Age-distribution of the LCBC discovery sample. b Age-distributions of the four replication samples. Colors in (a, b) highlight the number of longitudinal scans available per sample (i.e., dark green denotes subjects with only one timepoint, light green denotes subjects with two timepoints, blue denotes subjects with more than two timepoints; stacked bars). The number of unique subjects (N) is given in total and per number of available timepoints. The total number of scan observations (obs) is given per cohort. c Spherical surface rendering of a nonsymmetrical (top) compared to the symmetrical template (bottom) used in the present study. Mean sulcal topography of the left and right hemispheres is shown in yellow and orange, respectively. Note the near-perfect alignment of left- and right-hemisphere topography on the symmetrical surface. d Visualization of asymmetry analysis at an example vertex (black circle). GAMMs were used to compute the zero-centered (i.e., demeaned) age trajectories of the left [s(LH-Age)] and right [s(RH-Age)] hemisphere at every vertex. Blue and yellow lines indicate the smooth age trajectory of mean cortical thickness for the left and right hemisphere, respectively, after each has been demeaned. The difference between these (green line) depicts the asymmetry trajectory [s(LH-Age)-s(RH-Age)] that was used for assessment of age-change in asymmetry, equivalent to the GAMM interaction term. Ribbons depict SEM. Significant asymmetry trajectories were downsampled to a lower resolution template (fsaverage5; N vertices = 10,242) and a dissimilarity matrix based on the distance between trajectories at every vertex pair (computed by sum of least squares) was obtained and submitted to partition around medoids (PAM) clustering. e Mean silhouette width was used to determine the optimal partition number. LH left hemisphere, RH right hemisphere.

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