Fig. 5: Boxplots of Spearman correlation between GDC and TCGA miRNA expression.
From: Uniform genomic data analysis in the NCI Genomic Data Commons
Top: Boxplots of Sample to Sample Correlation between GDC and TCGA by Project. n = 80/429/849/312/45/221/47/198/5/532/91/326/326/103/526/424/498/387/87/461/183/187/547/76/263/452/430/156/569/126/444/56/80 biologically independent samples for projects ACC/BLCA/BRCA/CESC/CHOL/COAD/DLBC/ESCA/GBM/HNSC/KICH/KIRC/KIRP/LAML/LGG/LIHC/LUAD/LUSC/MESO/OV/PAAD/PCPG/PRAD/READ/SARC/SKCM/STAD/TGCT/THCA/THYM/UCEC/UCS/UVM, respectively. Bottom: Combined Boxplots and Density Plots of miRNA to miRNA Correlation between GDC and TCGA by Average Expression Level. All miRNAs are categorized in “Low-Expressed” and “Other” groups. Mean and standard deviation of miRNA to miRNA Spearman’s correlations are shown.
