Table 2 Average reads of murine viruses from PDX and non-PDX cancer samples (CTR) with total reads count over 200.
From: Presence of complete murine viral genome sequences in patient-derived xenografts
Viral Names | Breast cancer | GBM | Lung cancer | Ovarian cancer | Bladder cancer | Colorectal cancer | Pancreatic cancer | Wild-type mouse | NSG mouse | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDX | CTR | PDX | CTR | PDX | CTR | PDX | CTR | PDX | CTR | PDX | CTR | PDX | CTR | |||
Abelson murine leukemia virus | 265 | 0 | 126 | 271 | 177 | 0 | 1131 | 485 | 233 | 0 | 651 | 31 | 4861 | 0 | 1477 | 136 |
AKR (endogenous) murine leukemia virus | 73286 | 0 | 234905 | 213 | 70546 | 0 | 414658 | 0 | 87206 | 0 | 229581 | 0 | 22206 | 0 | 671 | 1824 |
AKT8 retrovirus | 2051 | 242 | 3305 | 517 | 1672 | 1 | 15855 | 539 | 1076 | 40 | 6047 | 17 | 16499 | 82 | 4262 | 352 |
Curionopolis virus | 29 | 0 | 0 | 0 | 25 | 0 | 156 | 0 | 9 | 0 | 42 | 0 | 309 | 0 | 240 | 20 |
Endogenous mouse mammary tumor virus Mtv1 | 68 | 0 | 0 | 0 | 57 | 0 | 692 | 0 | 43 | 0 | 36 | 0 | 1815 | 0 | 126 | 184 |
Exogenous mouse mammary tumor virus | 74 | 0 | 0 | 0 | 58 | 0 | 698 | 0 | 49 | 0 | 24 | 0 | 2146 | 0 | 157 | 247 |
Friend spleen focus-forming virus | 121 | 0 | 265 | 15 | 1082 | 0 | 839 | 0 | 44 | 0 | 1673 | 0 | 2971 | 0 | 567 | 88 |
Harvey murine sarcoma virus | 9 | 2 | 1 | 2 | 5 | 0 | 40 | 8 | 7 | 0 | 35 | 0 | 247 | 1 | 266 | 38 |
HoMuLV murine leukemia virus | 65 | 0 | 0 | 1 | 104 | 0 | 36 | 0 | 15 | 0 | 15 | 0 | 5378 | 0 | 172 | 17 |
Intracisternal A-type particle IAP | 57 | 0 | 6 | 1 | 63 | 0 | 453 | 1 | 52 | 0 | 160 | 0 | 1042 | 0 | 2874 | 103 |
Lactate dehydrogenase-elevating virus | 1066 | 0 | 0 | 0 | 1069 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
MLV-related virus CFS | 514 | 0 | 4 | 10 | 1071 | 0 | 1274 | 0 | 910 | 0 | 1485 | 0 | 33164 | 0 | 2216 | 226 |
Moloney murine leukemia virus | 2575 | 0 | 11735 | 66 | 4747 | 0 | 20787 | 617 | 5780 | 0 | 9366 | 0 | 28222 | 0 | 1867 | 193 |
Moloney murine sarcoma virus | 2910 | 13 | 2149 | 26 | 1829 | 0 | 19020 | 177 | 2158 | 0 | 8932 | 0 | 12031 | 1 | 3599 | 361 |
Mouse mammary tumor virus | 122 | 0 | 0 | 0 | 123 | 0 | 1502 | 0 | 68 | 0 | 81 | 0 | 2067 | 0 | 324 | 628 |
Murine AIDS virus-related provirus | 10788 | 0 | 34188 | 69 | 5913 | 0 | 39649 | 0 | 6006 | 0 | 14073 | 0 | 451126 | 0 | 10167 | 421 |
Murine leukemia virus | 124602 | 0 | 360905 | 628 | 123725 | 0 | 721918 | 1098 | 113269 | 0 | 377134 | 0 | 566305 | 0 | 27359 | 4756 |
Murine leukemia virus SL3-2 | 3520 | 0 | 4907 | 54 | 9808 | 0 | 18535 | 0 | 1318 | 0 | 12369 | 0 | 8243 | 0 | 1339 | 326 |
Xenotropic murine leukemia virus | 18111 | 0 | 78568 | 69 | 10516 | 0 | 170003 | 0 | 13798 | 0 | 67339 | 0 | 62027 | 0 | 3887 | 370 |
XMRV | 7221 | 0 | 20383 | 26 | 1992 | 0 | 116378 | 0 | 53253 | 0 | 43398 | 0 | 55809 | 0 | 3095 | 460 |
