Table 2 Bacterial genera associated with respiratory infections within each dietary regime based on GLMMs.
From: Diet and gut microbiome enterotype are associated at the population level in African buffalo
Disease | Diet regime | Number of negative and positive samples | Number of genera evaluated | Positively associated genera | Negatively associated genera |
|---|---|---|---|---|---|
Mycoplasma bovis | Restricted | 7 positive 155 negative | 373 | Viridibacillus (est. = 2.74, q = 0.0062) | None |
Bovine herpesvirus | Hay/Green Vegetation | 193 positive 26 negative | 468 | Saccharofermentans (est = 0.74, | Domibacillus (est = −2.62, q = 0.013) |
Clostridioides (est = 35.9, q = 0.013) | Paucisalibacillus (est = −2.312, q = 0.045) | ||||
Catenisphaera (est = 14.6, q = 0.037) | Pseudoflavonifractor (est = −1.68, q = 0.032) | ||||
Patulibacter (est = 21.30, q = 0.045) q = 0.032) | |||||
Bovine viral diarrhea virus | Restricted | 41 positive 160 negative | 391 | None | Actinobacter (est = −0.53, q = 0.046) |
Phascolarctobacterium (est = −1.37, q = 0.040) | |||||
Psychrobacillus (est = −0.66, q = 0.040) | |||||
Methanocorpusculum (est = −24.4, q = 0.042) | |||||
DTU089 (est = −4.29, q = 0.017) | |||||
Ureibacillus (est = −0.74, q = 0.049) |
