Fig. 4: Hydrophobic and ionic reagents change the IF-microtubule bond properties. | Nature Communications

Fig. 4: Hydrophobic and ionic reagents change the IF-microtubule bond properties.

From: Vimentin intermediate filaments stabilize dynamic microtubules by direct interactions

Fig. 4

a Valid unbinding rates ru,eff and potential widths xu to simulate the experimental data shown in Fig. 3c, e, and g for the different buffer conditions: pure CB (gray), CB with TX100 (orange), and CB with additional magnesium (blue). ru,eff and xu pairs, which are valid for several buffer conditions, are color coded by mixed colors. ru,eff and xu increase from additional magnesium chloride across pure CB to added TX100. b Energy landscape for the theoretical modeling of the IF-microtubule bond: A two-state model (unbound, bound) is sufficient to describe the experimental data shown in Fig. 3. From the binding and unbinding rates, we calculated the differences in activation energies EAb and EAu (see Eq. (8) in the Supplementary Information) of bonds in different buffer conditions to open or close. However, the absolute values cannot be determined, as indicated by the graph break (black double-lines). For different buffer conditions, the position of the energy barrier relative to the unbound and bound state, xb and xu, respectively, changes. Source data are provided as a Source Data file.

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