Table 1 The RNA 2D structure template library (* manually curated templates developed specifically for this project).
From: R2DT is a framework for predicting and visualising RNA secondary structure using templates
RNA type | Template source | Number of templates | Manually curated? |
|---|---|---|---|
SSU rRNA | CRW (covariation-based) RiboVision (3D-based) | 654 8* | Yes Yes |
LSU rRNA | RiboVision | 21* | Yes |
5S rRNA | CRW | 200 | Yes |
tRNA | GtRNAdb | 74* | Yes |
RNAse P | RNAse P database | 17 2* | Yes Yes |
Small RNAs | Rfam | 2671 | No |
Total: 3647 |
