Table 6 Important omics biomarkers identified by MOGONET in the BRCA dataset.

From: MOGONET integrates multi-omics data using graph convolutional networks allowing patient classification and biomarker identification

Omics data type

Biomarkers

mRNA expression (15)

SOX11, AMY1A, SLC6A15, FABP7, SLC6A14, SLC6A2, FGFBP1, DSG1, UGT8, ANKRD45, PI3, SERPINB5, COL11A2, ARHGEF4, SOX10

DNA methylation (9)

GPR37L1, MIR563, OR1J4, ATP10B, KRTAP3-3, FLJ41941, TMEM207, CDH26, MT1DP

miRNA expression (6)

hsa-mir-205, hsa-mir-187, hsa-mir-452, hsa-mir-20b, hsa-mir-224, hsa-mir-204

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