Fig. 1: LHSM genome assembly. | Nature Communications

Fig. 1: LHSM genome assembly.

From: Population-scale peach genome analyses unravel selection patterns and biochemical basis underlying fruit flavor

Fig. 1

a Genomic features and variation landscape across the LHSM and Lovell v2.0 genome assemblies. The outer gray (left) and yellow (right) tracks represent the chromosomes of the LHSM and Lovell v2.0 genome assemblies, respectively, with unit in Mb. b Genomic synteny map and three misorientations (I, II, III) and the adjacent misordering (IV-1 and IV-2) on Chr3 between these two genome assemblies. c Validation of the misorientations and the misordering by aligning Hi-C data of the LHSM genome to the Lovell v2.0 genome. The arrangements of I, II, III, IV-1, and IV-2 regions (highlighted by distinct color lines or boxes) on the LHSM genome are supported by contacts. The color intensity of the Hi-C heatmap represents the number of links between two 40-kb windows.

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