Fig. 2: CRE configuration in the NR and RPE domains.
From: Analysis of gene network bifurcation during optic cup morphogenesis in zebrafish
a Schematic representation of the functional relationship between DOCRs, either activating (green) or repressing (red), and their associated DEGs. b The graph illustrates the correlation between the levels of differentially expressed TFs (log2FC) and the accessibility of their associated DOCRs (log2). c The table summarizes the number of activating or repressing CREs associated with either all the DEGs or only with the differentially expressed TFs. d, e Histograms correlating the number of TFs associated with activating or repressing CREs to the number of peaks per gene, for both the NR (d) and RPE (e) domains.
