Table 1 Binding capacity, neutralizing activity, and gene family analysis of 13 monoclonal Abs isolated from Patient #5, Patient #2, and Patient #22.
Patient | mAbs | Binding to RBD | Pseudovirus (μg/ml) | Live virus (μg/ml) | Heavy chain | Kappa chain (K) or Lambda chain (L) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Kd (nM) | Competing w/ ACE2 | IC50 | IC80 | IC50 | IC80 | IGHV | HCDR3 | HCDR3 length | SHM (%) | IGK(L)V | K(L)CDR3 | K(L)CDR3 length | SHM (%) | ||
P#5 | P5A-1B9 | 3.41 | +++ | 0.0014 | 0.0053 | 0.0043 | 0.0441 | 4-59*01 | ASNGQYYDILTGQPPDYWYFDL | 22 | 0.70 | K4-1*01 | QQYYSTPLT | 9 | 0.00 |
P#22 | P22A-1D1 | 5.79 | +++ | 0.0038 | 0.0625 | 0.0198 | 0.1321 | 3-53*01 | ARDRDYYGMDV | 11 | 0.00 | K1-9*01 | LHLNSYRT | 8 | 0.38 |
P#5 | P5A-2G7 | 3.95 | +++ | 0.0044 | 0.0287 | 0.1814 | 0.8355 | 4-61*01 | ARERCYYGSGRAPRCVWFDP | 20 | 0.34 | L2-14*01 | SSYTSSSTLVV | 11 | 0.74 |
P#5 | P5A-1D1 | 6.83 | +++ | 0.0096 | 0.0691 | 0.0189 | 0.0743 | 3-53*01 | ARDLYYYGMDV | 11 | 0.35 | K1-9*01 | QQLNSYPT | 8 | 0.76 |
P#5 | P5A-1B8 | 4.28 | +++ | 0.0115 | 0.0501 | 0.0168 | 0.0857 | 3-53*01 | ARETLAFDY | 9 | 1.40 | K1-9*01 | QQLNSYPPA | 9 | 0.00 |
P#5 | P5A-2G9 | 15.94 | +++ | 0.0158 | 0.1466 | 0.0113 | 0.1187 | 3–33*01,3–33*06 | ARWFHTGGYFDY | 12 | 0.00 | L5-37*01 | MIWPSNALYV | 10 | 0.35 |
P#5 | P5A-1D2 | 14.02 | +++ | 0.0186 | 0.1025 | 0.0273 | 0.4325 | 3-53*01 | ARALQVGATSDYFDY | 15 | 1.40 | L1-40*01 | QSCDSSLSVVV | 11 | 1.11 |
P#5 | P5A-3C8 | 1.30 | +++ | 0.0206 | 0.1031 | 0.0112 | 0.1499 | 3-53*01 | ARDLQEHGMDV | 11 | 1.05 | K1-9*01 | QHLNSYPPGYT | 11 | 1.14 |
P#2 | P2C-1F11* | 3.64 | +++ | 0.0286 | 0.1195 | 0.0323 | 0.1779 | 3-66*01,3-66*04 | ARDLVVYGMDV | 11 | 1.75 | K3-20*01 | QQYGSSPT | 8 | 0.00 |
P#2 | P2B-2F6* | 5.57 | +++ | 0.0500 | 0.6074 | 0.4074 | 2.4309 | 4-38-2*02 | ARAVVGIVVVPAAGRRAFDI | 20 | 0.69 | L2-8*01 | SSYAGSNNLV | 10 | 0.00 |
P#2 | P2B-1A10 | 38.41 | +++ | 0.0974 | 0.7446 | 0.0639 | 0.3053 | 3-53*01 | AREGPKSITGTAFDI | 15 | 0.35 | K1-33*01,K1D-33*01 | QQYDNLPMYT | 10 | 0.38 |
P#5 | P5A-3B4 | 1.16 | + | 0.0993 | 1.0657 | 0.0561 | 1.0080 | 5-51*01 | ARRDSTYGGNTDY | 13 | 0.35 | L1-44*01 | AAWDDSLNGVV | 11 | 0.00 |
P#5 | P5A-3C12 | 8.47 | +++ | 0.0996 | 0.4679 | 0.2636 | 2.6783 | 2–5*02 | AHSLFLTVGYSSSWSPFDY | 19 | 0.00 | K4-1*01 | QQYYSTPHT | 9 | 0.00 |