Table 1 Summary of structure modeling by C-QUARK and QUARK on the 247 test proteins.

From: Improving fragment-based ab initio protein structure assembly using low-accuracy contact-map predictions

 

First model

Best in top-five models

 

TM-score

RMSD (Å)

TM-score

RMSD (Å)

C-QUARK

0.606 (186, 75%)

6.94

0.629 (196, 79%)

6.22

QUARK

0.423 (71, 29%)

12.14

0.468 (90, 36%)

10.31

P-value

\(6.8\times {10}^{-51}\)

\(1.8\times {10}^{-29}\)

\(2.0\times {10}^{-47}\)

\(9.1\times {10}^{-23}\)

  1. P-values are calculated between C-QUARK and QUARK using one-sided Student’s t-tests. The values in parentheses represent the number and percentage of the cases with TM-scores >0.5.
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