Fig. 3: SF and hinge residues display ion-dependent chemical shifts. | Nature Communications

Fig. 3: SF and hinge residues display ion-dependent chemical shifts.

From: Ion-dependent structure, dynamics, and allosteric coupling in a non-selective cation channel

Fig. 3

Backbone amide (a) and ILV methyl (d) chemical shift perturbations (CSPs) along with 13C’ (c) and 13CÎħ (b) chemical shift differences (Δδ) were calculated for NaK in 100 mM K+ vs 600 mM Na+. CSPs (calculated as described in Methods) and Δδ values for residues assigned in both conditions are plotted against residue number. In each plot, the cyan line indicates 1.5σ above the 10% trimmed mean. CSPs and Δδ values are also plotted on the NaK structure (3E8H [10.2210/pdb3E8H/pdb], 2 adjacent of 4 subunits shown for clarity). Color scale bars are shown for each plot. 1H–15N CSPs, 13C’ Δδ, and 13CÎħ Δδ values are plotted on the backbone and residues for which data are not available are colored gray. 1H–13Cmethyl CSPs are plotted on the side-chains and the backbone is shown in gray. Secondary structure elements are indicated on the plots and labeled on the structure in panel a.

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