Table 1 Data sets used from multi-center data sources.
From: Accurate recognition of colorectal cancer with semi-supervised deep learning on pathological images
Data source | Dataset usage | Sample preparation | Examination type | Population | CRC | Non-CRC | Total | |||
|---|---|---|---|---|---|---|---|---|---|---|
Radical surgery/colonoscopy | Subjects | Slides | Subjects | Slides | Subjects | Slides | ||||
Xiangya Hospital (XH, Dataset-PATT) | PATTa | FFPEb | 100%/0% | Changsha, China | 614 | 614 | 228 | 228 | 842 | 842 |
NCT-UMM (Dataset-PAT) | PATc | FFPE | NAd | Germany | NA | NA | NA | NA | NA | 86 |
Xiangya Hospital (XH-Dataset-PT) | PTe | FFPE | 80%/20% | Changsha, China | 3990 | 7871 | 1849 | 2132 | 5839 | 10,003 |
Xiangya Hospital (XH-Dataset-HAC) | PT & HACf | FFPE | 89%/11% | Changsha, China | 98 | 99 | 97 | 114 | 195 | 213 |
Pingkuang Collaborative Hospital (PCH) | PT & HAC | FFPE | 60%/40% | Jiangxi, China | 50 | 50 | 46 | 46 | 96 | 96 |
The Third Xiangya Hospital (TXH) | PT & HAC | FFPE | 61%/39% | Changsha, China | 48 | 70 | 48 | 65 | 96 | 135 |
Hunan Provincial People’s Hospital (HPH) | PT & HAC | FFPE | 61%/39% | Changsha, China | 49 | 50 | 49 | 49 | 98 | 99 |
Adicon clinical laboratory (ACL) | PT & HAC | FFPE | 22%/78% | Changsha, China | 100 | 100 | 107 | 107 | 207 | 207 |
Fudan University Shanghai Cancer Center (FUS) | PT & HAC | FFPE | 97%/3% | Shanghai, China | 100 | 100 | 98 | 98 | 198 | 198 |
Guangdong Provincial People’s Hospital (GPH) | PT & HAC | FFPE | 77%/23% | Guangzhou, China | 100 | 100 | 85 | 85 | 185 | 185 |
Southwest Hospital (SWH) | PT & HAC | FFPE | 93%/7% | Chongqing, China | 99 | 99 | 100 | 100 | 199 | 199 |
The First Affiliated Hospital of Air Force Medical University (AMU) | PT & HAC | FFPE | 95%/5% | Xi’an, China | 101 | 101 | 104 | 104 | 205 | 205 |
Sun Yat-Sen University Cancer Center (SYU) | PT & HAC | FFPE | 100%/0% | Guangzhou, China | 91 | 91 | 6 | 6 | 97 | 97 |
Chinese PLA General Hospital (CGH) | PT | FFPE | 100%/0% | Beijing, China | 0 | 0 | 100 | 100 | 100 | 100 |
The Cancer Genome Atlas (TCGA-FFPE) | PT | FFPE | 100%/0% | U.S. | 441 | 441 | 5 | 5 | 446 | 446 |
Total | 5881 | 9786 | 2922 | 3239 | 8803 | 13,111 |
