Fig. 7: Principle component analysis associates bloom phases with distinct physiological states and extracellular signatures. | Nature Communications

Fig. 7: Principle component analysis associates bloom phases with distinct physiological states and extracellular signatures.

From: Seasonal mixed layer depth shapes phytoplankton physiology, viral production, and accumulation in the North Atlantic

Fig. 7

(Top row) PCA showing interrelationships among measured intra- and extracellular properties for phytoplankton populations across bloom seasons combined with clade relative abundance determined by either a Pigment-based community composition62 or b 16S rRNA-based community composition61. Symbols are shaped and colored by station. Small symbols represent individual sampling events during each bloom phase; large symbols represent the average value for each respective bloom phase. Percent variability in each dimension is the amount of variance explained in the dataset. Ellipses represent the 95% concentration estimate. W.Tran = Winter Transition; Acc = Accumulation; Clim = Climax; Decl = Decline. (Bottom row) PCA scores and vectors for measured intra- and extracellular properties with respect to c Pigment-based community composition and d 16S rRNA-based community composition. Longer arrows represent a stronger correlation with each respective dimension. Phytoplankton cells L−1 = phytoplankton cell concentration; ROS = reactive oxygen species in phytoplankton (log10 fold change in fluorescence from unstained); Comp. membrane = % of phytoplankton population with compromised membranes; TEP cell−1 = transparent exopolymer particle concentration (µg XG eq. L−1) normalized to bacteria and phytoplankton concentration; Virus cell−1 = virus concentration normalized to bacteria and phytoplankton concentrations; OxPC PC−1 = oxidized phosphatidylcholine (peak area) normalized to total phosphatidylcholine; TAG ChlA−1 = triacylglycerol (pM) normalized to ChlA (peak area/L); Caspase activity = caspase activity (µmol caspase substrate cleaved h−1 µg protein−1); Metacaspase activity = metacaspase activity (µmol metacaspase substrate cleaved h−1 µg protein−1); DOCSA = seasonally accumulated dissolved organic carbon; Phytoplankton biovolume L−1 = phytoplankton µl L−1; Stratification = stratification of the upper 300 m, expressed as buoyancy frequency (s−1). Biomarkers are plotted according to their co-variability with phytoplankton groups defined by pigments (i.e., Green Algae, Cyanobacteria, Diatoms, Dinoflagellates, Haptophytes) or 16S (i.e., Cyanobacteria, Chrysophyceae, Dictyochophyceae, Prymnesiophyceae, Rappemonad, Bolidophyceae, ASV357, Bacillariophyceae, Cryptophyceaea, Micromonas, Bathycoccus, Ostreococcus).

Back to article page