Fig. 2: Comparison of identification rates across all CAMPI workflows.

On the left side, the bar charts show the number of identified spectra using the reference (REF) database (orange), the number of identified spectra using the multi-omic (MO) database (dark blue) and total amount of measured spectra (red). On the right side, the light blue bars represent the identification rate calculated as the percentage of spectra that yielded a peptide identification at 1% FDR for both the REF database (orange) and the MO database (dark blue). The specific protocols can be found in Supplementary Data 1. For database searching, X!Tandem was used as a single search engine. Source data is provided in Supplementary Data 2.