Table 2 TCR CDR atomic contacts with peptide and MHC (percentage of contacts).

From: Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors

 

α chain

β chain

CDR1

CDR2

HV4

CDR3

CDR1

CDR2

HV4

CDR3

RLQ3

peptide

5

0

0

53

0

15

0

27

MHC

7

33

0

11

2

11

0

36

YLQ7

peptide

19

0

0

36

12

4

0

29

MHC

24

48

2

11

2

11

0

2

  1. Contacts were calculated between non-hydrogen atoms with a 4.0 Å distance cutoff.
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