Fig. 3: Alignment average nucleotide identity (ANI) tree of Escherichia coli MAGs.
From: Rare transmission of commensal and pathogenic bacteria in the gut microbiome of hospitalized adults
MAGs identified as E. coli, medium quality or above and at least 75% the mean length of the reference genomes are included. Several reference genomes are included and labeled with an asterisk. Clusters at the 99% ANI level corresponding to ST131 (purple) and ST648 (orange) are highlighted. Source Data for this figure are provided in Supplementary Data 10.
