Table 1 Data collection and refinement statistics.
From: A structural basis for the diverse linkage specificities within the ZUFSP deubiquitinase family
| Â | Mug105 | TcZUP::Ubiquitin-PA |
|---|---|---|
PDB ID | 7OIY | 7OJE |
Wavelength (Ã…) | 0.968 | 1.000 |
Resolution range | 39.46–2.05 (2.124–2.05) | 51.67–2.05 (2.123–2.05) |
Space group | P 41 | P 61 |
Unit cell | 88.24 88.24 111.01 90 90 90 | 151.61 151.61 83.75 90 90 120 |
Unique reflections | 53,097 (5246) | 67,359 (6328) |
Multiplicity | 6.0 (6.2) | 8.6 (7.4) |
Completeness (%) | 99.76 (99.39) | 97.93 (92.88) |
Mean I/sigma(I) | 10.4 (1.1) | 12.84 (1.1) |
R-meas | 0.138 (1.65) | 0.150 (1.87) |
R-pim | 0.056 (0.66) | 0.051 (0.67) |
CC1/2 | 0.998 (0.441) | 0.998 (0.411) |
Reflections used in refinement | 53,081 (5246) | 67,342 (6318) |
Reflections used for R-free | 2000 (195) | 1927 (180) |
R-work/R-free (%) | 17.26/20.39 | 18.52/21.86 |
RMS (bonds) | 0.003 | 0.006 |
RMS (angles) | 0.5 | 0.78 |
Ramachandran favored (%) | 96.69 | 97.45 |
Ramachandran allowed (%) | 2.69 | 2.43 |
Ramachandran outliers (%) | 0.62 | 0.12 |
Rotamer outliers (%) | 0.45 | 0.26 |
Clashscore | 2.39 | 1.8 |
Average B-factor | 45.57 | 61.63 |
 Macromolecules | 45.28 | 62.69 |
 Ligands | 64.8 | 50.88 |
 Solvent | 49.34 | 44.34 |
