Fig. 3: Evolutionary dynamics of V. cholerae O139. | Nature Communications

Fig. 3: Evolutionary dynamics of V. cholerae O139.

From: Vibrio cholerae O139 genomes provide a clue to why it may have failed to usher in the eighth cholera pandemic

Fig. 3

a–c Linear regression plots of (a) the relationship between the RTT and year of isolation, i.e., the SNP accumulation rate of each of the O139 waves, (b) the number of AMR genes per genome, plotted per year of isolation, (c) the relationship between the number of AMR genes and root to tip distance (RTT). For (a–c), points are colored by wave (see key). The mean RTT is depicted by the linear regression line, with standard error depicted by the shaded bars. R2 values and equations of the lines are also shown in the plots. d The proportion of varying numbers of AMR genes carried by each of the O139 waves/clades. Bars are colored by number of genes (see key).

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