Fig. 4: VJ gene usage and pairing and TCR diversity in TET subtypes.
From: The immune landscape of human thymic epithelial tumors
(a) Heatmap showing the proportion of each TCRβ V and J gene segment present in total T cells from each group, normalized per column. Gene segments positioned according to genomic location. (b) Frequency of V-J gene pairs at the TCRβ locus of each group. (c) Same scheme as in (a) applied to TCRα V and J gene segments, normalized per column. (d) Same scheme as in (b) applied to TCRα V-J gene pairs. (e) UMAP plot of all T cells from TET samples (n = 6), colored by the number of TCR clonotypes detected. (f) Bar plot showing clonotypic diversity among the three groups of TET samples (n = 2, 2 and 2 for T1, T2 and T3, respectively). Source data are provided as a Source Data file.
