Fig. 2: HiFi metagenomic sequencing reconstructs accurate and long prokaryotic genomes. | Nature Communications

Fig. 2: HiFi metagenomic sequencing reconstructs accurate and long prokaryotic genomes.

From: HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota

Fig. 2

a Single nucleotide variation (SNV) rate of HRGM species (n = 1521) and Bifidobacterium animalis (red dot). b Genome alignment plot between B. animalis cMAG (x-axis) and the closest isolated genome (y-axis). c SNV rate of B. animalis cMAG and its conspecific HRGM genomes (n = 102). d Percentile rank SNV rate of cMAGs (n = 77) among conspecific genomes. e Assembled genome length of cMAG (n = 102) and HRGM (n = 5414) species. The horizontal dashed line represents the length of the longest HiFi cMAG. f Genome alignment plot between Bacteroides ovatus cMAG (x-axis) and the closest isolated genome (y-axis). g SNV rate of B. ovatus cMAG and conspecific HRGM genomes (n = 1056). The maximum and the minimum of the boxplots represent the 10th and 90th percentile of the data. The upper and lower bounds of the box represent the 25th and 75th percentile. The center bar represents the median. All the outliers are shown in the plots.

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