Fig. 3: Assessment of data integration by UniverSC versus multiple pipelines.
From: A flexible cross-platform single-cell data processing pipeline
Integration output of Chromium data processed by UniverSC (“Reference” in grey), SmartSeq2 data processed via UniverSC (in red), and SmartSeq2 data processed via zUMIs (in blue). (A) A three-way integration. (B) Integration of reference and SmartSeq2 (UniverSC). (C) Integration of reference and SmartSeq2 (zUMIs). For (B) and (C), kBET and Silhouette scores are shown on the lower right corner. Different colours of dots represent different clusters in the left column. Source data is provided as a Source Data file.
