Fig. 5: Visualization of 421 cells undergoing differentiation. | Nature Communications

Fig. 5: Visualization of 421 cells undergoing differentiation.

From: A spectral method for assessing and combining multiple data visualizations

Fig. 5

a Three examples of candidate visualizations. The individual cells are marked by five different symbols and colors according to the time points they were captured and sequenced. More examples are included in Supplementary Fig. 11. b Boxplots (center line, median; box limits, upper and lower quartiles; points, outliers) of eigenscores for all 16 candidate visualizations, each containing n = 421 samples. c The proposed meta-visualization using kPCA. d Median Silhouette indices versus Kendall’s tau statistics for the 16 candidate and the 2 meta-visualizations (Red: proposed spectral meta-visualization; Orange: naive simple average meta-visualization). Source data are provided as a Source Data file.

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