Table 1 P. pachyrhizi genome assembly metrics

From: Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi

 

K8108

MT2006

UFV02

Assembly size (Gb)

1.083

1.0574

1.273

Total no of contigs

6505

7464

3140

Contig N50 length (Kb)

278.753

222.464

677.464

Max contig length (Mb)

3.028

3.054

4.158

Min contig length (Kb)

16.399

21.118

11.733

Complete BUSCOs (%)

90.19

90.14

89.91

Complete single-copy BUSCO (%)

15.70

15.87

22.56

Complete duplicated BUSCO (%)

74.49

74.26

67.35

Fragmented BUSCO (%)

1.36

1.36

1.19

Missing BUSCO (%)

8.45

8.50

8.90

Total BUSCO

1764

1764

1764

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