Table 1 Homology of each fragment of recombinant JS/LG/21 with the corresponding fragment of genotype I and genotype II African swine fever viruses
From: Highly lethal genotype I and II recombinant African swine fever viruses detected in pigs
Fragment | Identity (%) with that of | Likely parent | ||||
|---|---|---|---|---|---|---|
ID | Position | Length (bp) | SD/DY-I/21 (Genotype I) | HLJ/18 (Genotype II) | ||
Start | End | |||||
F1 | 1 | 19,273 | 19,273 | 99.93 | 71.29 | Genotype I |
F2 | 19,274 | 33,248 | 13,975 | 27.50 | 99.99 | Genotype II |
F3 | 33,249 | 59,378 | 26,130 | 99.99 | 93.71 | Genotype I |
F4 | 59,379 | 63,494 | 4116 | 96.55 | 100.00 | Genotype II |
F5 | 63,495 | 66,708 | 3214 | 100.00 | 95.41 | Genotype I |
F6 | 66,709 | 77,562 | 10,854 | 89.57 | 100.00 | Genotype II |
F7 | 77,563 | 81,254 | 3692 | 99.89 | 97.49 | Genotype I |
F8 | 81,255 | 86,883 | 5629 | 97.00 | 100.00 | Genotype II |
F9 | 86,884 | 102,453 | 15,570 | 99.36 | 95.43 | Genotype I |
F10 | 102,454 | 115,776 | 13,323 | 93.73 | 100.00 | Genotype II |
F11 | 115,777 | 118,739 | 2963 | 100.00 | 90.15 | Genotype I |
F12 | 118,740 | 128,884 | 10,145 | 96.03 | 99.98 | Genotype II |
F13 | 128,885 | 131,665 | 2781 | 100.00 | 98.01 | Genotype I |
F14 | 131,666 | 136,729 | 5064 | 98.32 | 100.00 | Genotype II |
F15 | 136,730 | 137,277 | 548 | 100.00 | 98.91 | Genotype I |
F16 | 137,278 | 140,785 | 3508 | 97.97 | 100.00 | Genotype II |
F17 | 140,786 | 142,184 | 1399 | 99.71 | 99.15 | Genotype I |
F18 | 142,185 | 149,814 | 7630 | 97.03 | 100.00 | Genotype II |
F19 | 149,815 | 154,854 | 5040 | 100.00 | 98.21 | Genotype I |
F20 | 154,855 | 185,431 | 30,577 | 85.60 | 99.98 | Genotype II |
