Fig. 1: Features of rubber tree clone CATAS8-79 genome with an assembly size of 1.58 Gb and a contig N50 of 11.21 Mb. | Nature Communications

Fig. 1: Features of rubber tree clone CATAS8-79 genome with an assembly size of 1.58 Gb and a contig N50 of 11.21 Mb.

From: Genomic insight into domestication of rubber tree

Fig. 1

I 18 chromosomes; II density transposon elements in a 100-kb sliding window; III density of copia retrotransposons in a 500-kb sliding window; IV density of gypsy retrotransposons in a 500-kb sliding window; V gene density in a 500-kb sliding window; VI gene expression values represented by the highest expression level in any of seven tissues based on log2(FPKM+1) of RNA-seq data; VII distribution of guanine-cytosine content in a 500-kb sliding window, average GC content reached to 34.62%; VIII Intragenomic syntenic regions covering at least 20 paralogues. Source data are provided as a Source data file.

Back to article page