Fig. 2: Phylogenomic analysis of C. glabrata strains from blood cultures of patients with bloodstream infections. | Nature Communications

Fig. 2: Phylogenomic analysis of C. glabrata strains from blood cultures of patients with bloodstream infections.

From: Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures

Fig. 2

a Unrooted phylogenomic tree of the 94 BSI strains and reference strain CBS138, as estimated using Maximum Likelihood with RaxML. It is based on a genome alignment generated from variant calling data. Within-patient diversity is demonstrated for all strains, in each patient. Strains from a given patient are color coded and sequence type is shown to the right. b Unrooted phylogenomic radial tree built with parsimony using PAUP is shown for each of 10 strains from 4 representative patients. Each patient was infected with a different C. glabrata ST. Also shown are Venn diagrams of numbers of genome variants, comparing 5 C. glabrata strains from individual patients.

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