Fig. 3: Two-step presumptive identification at the colony-level.
From: Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology
a 32 × 32 confusion matrix for single colony species ID (in absolute value). Phylogenetic group subdivisions are indicated with black lines. b 16 × 16 confusion matrix for single colony phylogenic group ID (in relative value referred to the group-based GT). c 32 × 32 matrix indicating relative increase/decrease (in absolute value and referred to a) after similarity-based smoothing. d 3D 16 × 16 matrix with column height indicating relative increment (blue)/decrement (pink) referred to baseline (green) matrix b. Source data are provided as a Source Data file.
