Fig. 3: pH-dependent structural transitions of Tyr. | Nature Communications

Fig. 3: pH-dependent structural transitions of Tyr.

From: Efficient optical plasmonic tweezer-controlled single-molecule SERS characterization of pH-dependent amylin species in aqueous milieus

Fig. 3

a Real-time SERS spectra of Tyr in the condition changes from pH 1.0 (black) to pH 10.5 (green), and pH 13.0 (red). Integration time: 10 s. b Representative SERS spectra of Tyr at pH 10.5 with 1 s integration time, showing spectral fluctuations arisen from Tyr in distinct charge states. c Comparison of SERS spectra (upper panel) and simulated Raman spectra (lower panel) of Tyr at pH 1.0 (black) and pH 13.0 (red), respectively. The SERS spectra are adopted from (a). The simulated Raman spectra and electrostatic potential are generated from DFT calculations on Tyr in +1 charged state as NH3+CH(CH2C6H4OH)COOH (d) and -2 charged state as NH2CH(CH2C6H4O-)COO- (e), respectively. Based on least-squares procedures, a scaling factor of 0.9770 was applied to the wavenumbers above 1000 cm−1 in simulated Raman spectra. The term (arb. units) is abbreviated for arbitrary units. d, e Electrostatic potential (ESP) values of Tyr in +1 charged state and -2 charged state mapped on 0.01 a.u. van der Waals surface, expressed in atomic units (a.u.).

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