Fig. 2: Summary comparison across HapMap samples. | Nature Communications

Fig. 2: Summary comparison across HapMap samples.

From: Utility of long-read sequencing for All of Us

Fig. 2

a Coverage on X-axis vs N50 on the Y axis, for samples NA24385, HG00514, HG00733, and NA19240 (HapMap). b Indels distribution for HapMap samples, indels length on the X-axis, and count and density (in red) on Y-axis (using a merge of DeepVariant and Clair3 for HiFi). c SV size distribution for HapMap samples, SVs length on the X-axis, and count and density (in red) on the Y-axis (using a merge of Sniffles and pbsv HiFi). d Circular plot for HapMap samples from outside in genes density (Brown), SNVs (substitutions) average density between HapMap data (Orange), SNVs (indels) average density between HapMap data (Aquamarine), deletions average density between HapMap data (Blue), insertions average count between HapMap data (Green).

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