Fig. 4: IBD coverage profile of all and unrelated Pf isolates in SEA. | Nature Communications

Fig. 4: IBD coverage profile of all and unrelated Pf isolates in SEA.

From: Strong positive selection biases identity-by-descent-based inferences of recent demography and population structure in Plasmodium falciparum

Fig. 4

a IBD coverage/proportions of all parasite genomes (n = 2055), including highly related and unrelated, in SEA. Labels on the top indicate the center of known or putative drug-resistance genes or genes involved in sexual commitment (*). b IBD coverage/proportions of unrelated genomes in SEA (n = 701). Annotations in (a) are shared with (b); regions with red shading indicate validated peaks (defined in “Methods”). Note: (1) different scales for y axes (IBD coverage on the left y-axis; IBD proportions on the right y-axis) were used in (a) versus (b) to better reveal the peaks; (2) the peaks around pph in (b) and ap2-g in (a) and (b) are IBD peak candidates that do not pass the peak validation step (see “Methods”). Source data are provided as a Source data file.

Back to article page