Table 1 Geographic distribution of the sample set

From: Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites

Region

MalariaGEN Pv4 dataset

Independent validation P. vivax dataset

No. isolates sequenced

No. high-quality independent monoclonal isolates

No. high-quality paired isolates

No. isolates sequenced*

No. high-quality independent monoclonal isolates

Africa (AF)

47

34

0

48

47

East Southeast Asia (ESEA)

262

151

6

494

62

Maritime Southeast Asia (MSEA)

76

59

4

1

1

Oceania (OCE)

205

120

2

1

1

South America (SAM)

159

135

0

203

92

West Asia (WAS)

46

31

0

88

87

West Southeast Asia (WSEA)

127

85

2

1

1

Total

922

615

14

836

291

  1. The countries represented within each regional group of the MalariaGEN Pv4 dataset are Ethiopia (AF), Cambodia, Thailand and Vietnam (ESEA), Malaysia (MSEA), Indonesia and Papua New Guinea (OCE), Brazil, Colombia, El Salvador, Mexico, Nicaragua and Peru (SAM), Afghanistan, India and Iran (WAS), and Myanmar and Thailand (WSEA). The Thai samples in ESEA and in WSEA derive from provinces east and west, respectively, of a previously described malaria-free corridor that runs through the centre of Thailand44,55. The countries represented in the independent (non-Pv4) P. vivax dataset are Eritrea, Ethiopia, Madagascar, Mauritania, Sudan and Uganda (AF), Cambodia and China (ESEA), The Philippines (MSEA), Papua New Guinea (OCE), Brazil, Colombia, Guyana, Panama and El Salvador (SAM), Afghanistan, India and Pakistan (WAS) and Bangladesh (WSEA).
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