Fig. 2: Circular map and comparative analysis of the IncC2 plasmid found in some V. cholerae O1 isolates from Lebanon in 2022. | Nature Communications

Fig. 2: Circular map and comparative analysis of the IncC2 plasmid found in some V. cholerae O1 isolates from Lebanon in 2022.

From: An unusual two-strain cholera outbreak in Lebanon, 2022-2023: a genomic epidemiology study

Fig. 2

Circles from innermost to outermost indicate (1) the nucleotide position of the plasmid of the VIC_202210_72 isolate (alternative name pVIC-11A), (2) the alignment throughout the plasmids between pVIC-11A (Lebanon, 2022) in the dark green, pCNRVC190243 (Yemen, 2019) (GenBank accession number OW443149.1) in medium green, and pYA00120881 (Zimbabwe, 2018) (GenBank accession number MT151380) in light green, (3) the G + C content map of pVIC-11A, and (4) the coding sequences (CDS) map of pVIC-11A, in which green arrows indicate antimicrobial drug resistance CDS, dark blue arrows transposase and integrase CDS, red arrows the CDS involved in conjugative transfer, yellow arrows those involved in the structure and cellular processes, and light blue CDS with other functions. The names of resistance genes within the YemVchMDRI are indicated above the corresponding CDS.

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