Table 1 Isolation metadata and quality control for 32 novel VpST3 strains

From: Evolutionary dynamics of the successful expansion of pandemic Vibrio parahaemolyticus ST3 in Latin America

Sample Names	Sequencing technique	Sequencing output (bp)	Mean Q30 to Base R1	Mean Q30 To Base R2	Total genome size (bp)	n° contigs	N50 (bp)	n° Contigs >1000 bp	Coverage
A1078098_1998-1-01_SouthAmerica_Peru	Illumina	3037235400	150	150	5,098,463	53	461,842	40	588X
A11A1198_1998-1-01_SouthAmerica_Peru_Lima	Illumina	252726900	150	150	5,217,388	58	428,132	43	49X
A12A1298_1998-1-01_SouthAmerica_Peru_Lima	Illumina	336173100	150	150	5,095,988	57	334,356	42	65X
A3A397_1997-1-01_SouthAmerica_Peru_Chancay	Illumina	859855200	150	150	5,193,685	56	312,677	42	166X
A4A497_1997-1-01_SouthAmerica_Peru_Cajamarca	Illumina	739590600	150	150	5,149,414	60	334,356	45	143X
A5A597_1997-1-01_SouthAmerica_Peru_Lambayeque	Illumina	477434400	150	150	5,104,770	64	289,565	48	92X
A6A697_1997-1-01_SouthAmerica_Peru_Lima	Illumina	138352200	150	150	5,158,059	70	255,583	54	27X
A8A897_1997-1-01_SouthAmerica_Peru_Lambayeque	Illumina	482647800	150	150	5,184,291	62	340,201	48	93X
A9A997_1997-1-01_SouthAmerica_Peru_Moquegua	Illumina	528629700	150	150	5,178,062	71	288,921	56	102X
B10B100_2000-1-01_SouthAmerica_Peru_Lima	Illumina	602956800	150	150	5,104,271	61	289,565	45	117X
B11B110_2000-1-01_SouthAmerica_Peru_Lima	Illumina	637577100	150	150	5,098,843	59	334,356	45	123X
B12B120_2000-1-01_SouthAmerica_Peru_Lima	Illumina	445713900	150	150	5,035,633	54	388,418	44	86X
B3B399_1999-1-01_SouthAmerica_Peru_Lima	Illumina	714816600	150	150	5,104,628	57	347,413	43	138X
B4B499_1999-1-01_SouthAmerica_Peru_Lima	Illumina	611731500	150	150	5,180,717	57	340,345	44	118X
B8B80_2000-1-01_SouthAmerica_Peru_Lambayeque	Illumina	102436800	150	150	5,071,641	58	304,117	54	20X
B9B90_2000-1-01_SouthAmerica_Peru_Lima	Illumina	746250300	150	150	5,237,354	58	427,280	44	144X
C10C101_2001-1-01_SouthAmerica_Peru_Iquitos	Illumina	428489700	150	150	5,188,427	56	427,036	41	83X
C11C112_2002-1-01_SouthAmerica_Peru_Lima	Illumina	323965800	150	150	5,172,805	89	198,175	69	63X
C12C122_2002-1-01_SouthAmerica_Peru_Lima	Illumina	168009300	150	150	5,183,728	57	392,233	43	33X
C1C10_2000-1-01_SouthAmerica_Peru_Huaral	Illumina	1289147100	150	150	5,102,914	53	312,835	39	250X
C2C20_2000-1-01_SouthAmerica_Peru_Lima	Illumina	817404900	150	150	5,121,698	56	347,630	43	158X
C4C41_2001-1-01_SouthAmerica_Peru_Lambayeque	Illumina	548107200	150	150	5,098,297	59	334,356	45	106X
D1D12_2002-1-01_SouthAmerica_Peru_Lima	Illumina	733331100	150	150	5,102,272	60	312,811	45	142X
D2D22_2002-1-01_SouthAmerica_Peru_Chiclayo	Illumina	398510100	150	150	5,177,250	61	336,355	48	77X
D3D32_2002-1-01_SouthAmerica_Peru_Lima	Illumina	953269800	150	150	5,101,837	58	334,356	45	185X
F1F1_2007-1-01_SouthAmerica_Chile_PuertoMontt	Illumina	504072000	150	150	5,091,206	73	267,905	56	98X
F2F2_1998-1-01_SouthAmerica_Chile_Antofagasta	Illumina	563799000	150	150	5,032,200	61	268,333	47	109X
F4F47_2007-1-01_SouthAmerica_Peru_	Illumina	607019100	150	150	5,102,814	54	433,108	40	118X
F7F7_2007-1-01_SouthAmerica_Chile_PuertoMontt	Illumina	348476700	150	150	5,096,747	56	312,654	41	67X
G1G1_2005-1-01_SouthAmerica_Chile_PuertoMontt	Illumina	703807800	150	150	5,103,511	55	461,882	39	136X
G2G2_1998-1-01_SouthAmerica_Chile_Antofagasta	Illumina	186309600	150	150	5,100,712	53	401,005	37	36X
G3G3_1998-1-01_SouthAmerica_Peru_Lima	Illumina	713747400	150	150	5,100,608	70	288,741	50	138X

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Table 1 Isolation metadata and quality control for 32 novel VpST3 strains

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