Fig. 5: Taxonomic profilers benchmarks and analysis of long-read datasets.
From: Taxometer: Improving taxonomic classification of metagenomics contigs
a K-fold evaluation description. Taxometer predictions are compared to the classifer annotations, not the ground truth labels. b An example of the number of true positives, false positives, and false negatives used in the k-fold evaluation, species level for the Rhizosphere dataset, MMseqs2 and Metabuli classifiers. The total number of contigs for Taxometer predictions equals the number of annotations initially returned by a classifier. c, d Real long-read datasets k-fold evaluation for Human Gut and Sludge datasets. Source data are provided as a Source Data file.
